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Jack R Auty

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    • Epidemiological Research into Alzheimer’s Disease and Common Pain Relieving Drugs
    • The inflammatory nature of microplastics
    • Zinc deficiency and Alzheimer’s disease
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    • TDP proteomics explorer
    • Ice breaker
    • Exploration of RNAseq and Epidemiological datasets
    • Feedback selector
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    • Pomodoro timer
    • Power Calculator
    • Power Calculator Cohen’s D
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    • A complete guide to ANOVAs in R
    • ANOVAs One-way and two-way
    • Finding an outlier using Cook’s distance
    • Generalized mixed modelling
    • How to make a simple bar graph in R
    • How to make a Rain Cloud Plot (aka a Rotated Violin plot)
    • Mediation analysis with nuisance variables.
    • Multi-level linear model (repeated measure ANOVA)
    • PCA and 3D PCA
    • Power analyses
    • Stepwise Multiple Regression
    • Student t test

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March 12, 2021 / Last updated : March 12, 2021 jackrrivers Blog

Teaching content

Week 4 Adaptive immune system

June 15, 2018 / Last updated : June 15, 2018 jackrrivers Blog

Talk on social media and science

Here is a presentation I did at the ARUK Early Career Researcher conference on the advantages of having an online presence as a scientist. More info to come soon! Download the presentation by clicking here – Don’t be a faceless researcher

August 11, 2016 / Last updated : August 22, 2016 jackrrivers Blog

Repurposing existing drugs for Alzheimer’s disease.

There is growing evidence for the role inflammation in Alzheimer’s disease progression. Genome wide association studies (GWAS) have found that variants of genes involved in regulating innate immune function confer a greater risk in developing Alzheimer’s disease(1 & 2). Examples include loss/reduction of function mutations in the anti-inflammatory/phagocytosis TREM-2 gene (3); variants of promotor regions […]

April 10, 2015 / Last updated : April 10, 2015 jackrrivers Blog

How does your body know when its damaged? New research on stroke and inflammation.

My lab in Manchester has just released a fascinating research paper that touches on the lovely scientific elements of serendipity, hypothesis falsification and surprise results. This paper has continued the great scientific tradition of generating more questions than answers. Have you ever wondered how does your body knows when it’s damaged? After your sprain your […]

February 3, 2015 / Last updated : February 4, 2015 jackrrivers Blog

Humans have at least one genetic disease – In the future could we have hundreds?

What is the point of having a blog if you are not going to engage in off-the-cuff speculation. So here goes- Every one of our genes is under constant threat of mutation from radiation, free radicals and merely being mis-copied during replication (just to name a few). So it stands to reason that genes that […]

July 11, 2014 / Last updated : February 10, 2015 jackrrivers Blog

The Unsaid Criticisms of Science

Two things that science is struggling with at the moment are reproducibility and translatability. The problem where results are reported by a lab and then other labs struggle to reproduce the same result is happening more and more. Begley et al. (2013) attempted to repeat simple experiments from 53 papers on treating cancer cells in culture. […]

July 1, 2014 / Last updated : July 13, 2014 jackrrivers Blog

Darwin vs Lamarck or Darwin and Lamarck?

I was reading about Jean-Baptiste Lamarck and it dawned on me that perhaps he was partly right about evolution. So, most people believe that Darwin was the first to propose the theory of evolution, but really, evolution just states that the diversity of life is due to inheritance with alteration over a long period of […]

June 20, 2014 / Last updated : October 24, 2014 jackrrivers Blog

Simple Statistics Provide Poor Prognosis for Science!

An article was published in 2006 called Why most published research findings are false(1). I have skim read it a few times, but recently I put the time in to read it thoroughly. It basically goes through a simple statistical analysis to suggest that even if all of research was performed using the absolute best scientific practices […]

May 30, 2014 / Last updated : July 14, 2014 jackrrivers Blog

Causation and Anti-Cancer Miracle Foods

Here is an interesting study that suggests your average diet contains both anti-cancer and cancer causing compounds and the effect sizes cancel out. For example bacon increases your risk of cancer and onion decreases your risk. So eat bacon and onions and you’ll be perfectly healthy.http://ajcn.nutrition.org/content/early/2012/11/27/ajcn.112.047142.abstract I was thinking about this paper and here’s the twist. Because […]

May 26, 2014 / Last updated : January 14, 2015 jackrrivers Blog

Why is Animal Research Failing?

Introduction Anyone who watches the news frequently might be aware of a very wide and deep fissure that exists in science today. They will be aware of this fissure because every week it appears that a disease is cured by a new compound. This compound might one week be found on the skin of a […]

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  • Lab Home Page
  • Research
    • Epidemiological Research into Alzheimer’s Disease and Common Pain Relieving Drugs
    • The inflammatory nature of microplastics
    • Zinc deficiency and Alzheimer’s disease
  • Publications
  • Outreach
  • Tools
  • Web apps
    • TDP proteomics explorer
    • Ice breaker
    • Exploration of RNAseq and Epidemiological datasets
    • Feedback selector
    • Novel Object Recognition Task Timer
    • Pomodoro timer
    • Power Calculator
    • Power Calculator Cohen’s D
  • R Code
    • A complete guide to ANOVAs in R
    • ANOVAs One-way and two-way
    • Finding an outlier using Cook’s distance
    • Generalized mixed modelling
    • How to make a simple bar graph in R
    • How to make a Rain Cloud Plot (aka a Rotated Violin plot)
    • Mediation analysis with nuisance variables.
    • Multi-level linear model (repeated measure ANOVA)
    • PCA and 3D PCA
    • Power analyses
    • Stepwise Multiple Regression
    • Student t test